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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Uqcrfs1, ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
Sequence ID:NM_025710
Entrez Gene ID:66694
Ensembl ID:ENSMUSG00000038462

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:13|13 A3.3

Chromosomal Position (from UCSC)

Chromosomal Position:13: 30540527 - 30545278

NM_025710 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
110303063218030633209
103113133063690230637184

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5249225Full LengthBC019934ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079986  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_025710 NP_079986 Q9CR68 EC 1.10.2.2 Rieske
UCR_TM

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC019934 AAH19934 Q9CR68 EC 1.10.2.2
AK003966 BAB23097 Q9CR68 EC 1.10.2.2
AK012180 BAB28081 Q9CR68 EC 1.10.2.2
AK014470 BAB29374 Q9CR68 EC 1.10.2.2
AK152391 BAE31179 Q9CR68 EC 1.10.2.2
AK153139 BAE31751 Q9CR68 EC 1.10.2.2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Uqcrfs1 NP_079986 R.norvegicus Uqcrfs1 291103   NP_001008888 97
H.sapiens UQCRFS1 7386 Gene Info NP_005994 89
D.melanogaster RFeSP 44390   NP_722715 69
A.gambiae AgaP_AGAP008955 1279923   XP_319708 60
S.pombe rip1 2540075   NP_595941 57
C.elegans isp-1 177609   NP_501361 56
S.cerevisiae RIP1 856689   NP_010890 55
N.crassa NCU06606 3878496   XP_962348 53
A.thaliana AT5G13440 831185   NP_196848 52
A.thaliana AT5G13430 831184   NP_568288 45
P.falciparum PF14_0373 811955   XP_001348547 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)