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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hopx, HOP homeobox
Sequence ID:NM_001159900
NM_001159901
NM_175606
Entrez Gene ID:74318
Ensembl ID:ENSMUSG00000059325

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 C3.3|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 77086989 - 77115123

 Exon Info From UCSC:
NM_001159900
NM_001159901
NM_175606

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4989797Full LengthBC024546HOP homeobox

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_783199  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001159900 NP_001153372    
NM_001159901 NP_001153373    
NM_175606 NP_783199 Q8R1H0 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC024546 AAH24546 Q8R1H0
AF492703 AAM46823 Q8R1H0
AF492704 AAM46824 Q8R1H0
AF534182 AAN05634 Q8R1H0
AF536202 AAN16320 Q8R1H0
AK003784 BAC25054 Q8R1H0
AK008297 BAC25214 Q8R1H0
AK008439 BAC25219 Q8R1H0
AK009007 BAC25235 Q8R1H0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hopx NP_783199 R.norvegicus Hopx 171160   NP_598305 100
H.sapiens HOPX 84525 Gene Info NP_115884 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)