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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tcl1, T cell lymphoma breakpoint 1
Sequence ID:NM_009337
Entrez Gene ID:21432
Ensembl ID:ENSMUSG00000041359

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 E|12 52.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:12: 105216786 - 105222713

NM_009337 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
20964106454966106455910
9651034106456432106456501
10351205106456868106457038
12061410106460742106460946

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30053730Full LengthBC052336T-cell lymphoma breakpoint 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033363  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009337 NP_033363 P56280 TCL1_MTCP1

Related Sequences

 
mRNAGenPeptSwissProt
AF031956 AAB87461 P56280
BC052336 AAH52336 P56280
AK149361 BAE28834 Q3UES7
Y15376 CAA75599 P56280

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tcl1 NP_033363 R.norvegicus Tcl1a 690575   NP_001103071 78
H.sapiens TCL1A 8115 Gene Info NP_001092195 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)