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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nck1, non-catalytic region of tyrosine kinase adaptor protein 1
Sequence ID:NM_010878
Entrez Gene ID:17973
Ensembl ID:ENSMUSG00000032475

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 E3.3|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 100495377 - 100546134

NM_010878 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15683100395421100396089
6841396100397676100398388
13971640100408847100409090
16411699100446413100446471

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3593441Full LengthBC002015non-catalytic region of tyrosine kinase adaptor protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035008  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010878 NP_035008 Q99M51 SH2
SH3_1

Related Sequences

 
mRNAGenPeptSwissProt
AF043259 AAC06352 Q99M51
AF084183 AAD13752 Q99M51
BC002015 AAH02015 Q99M51
AK027980 BAC25688 Q8BMV0
AK036870 BAC29611 Q8BZ27
AK053155 BAC35286 Q8BH99
AK054051 BAC35635 Q8BH99

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nck1 NP_035008 R.norvegicus Nck1 300955   NP_001100321 100
H.sapiens NCK1 4690 Gene Info NP_006144 99
A.gambiae AgaP_AGAP010135 1279555   XP_319290 51
D.melanogaster dock 33262   NP_722658 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta