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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rph3a, rabphilin 3A
Sequence ID:NM_011286
Entrez Gene ID:19894
Ensembl ID:ENSMUSG00000029608

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 120941632 - 121009350

 Exon Info From UCSC:
NM_011286

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5364086Full LengthBC042585rabphilin 3A
5698459Full LengthBC050883rabphilin 3A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035416  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011286 NP_035416 P47708 C2
RPH3A_effector

Related Sequences

 
mRNAGenPeptSwissProt
BC042585 AAH42585 P47708
BC050883 AAH50883 P47708
D29965 BAA06231 P47708
AB112924 BAD07029 Q768S5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rph3a NP_035416 R.norvegicus Rph3a 171039   NP_598202 98
H.sapiens RPH3A 22895 Gene Info NP_001137326 90
C.elegans rbf-1 175943   NP_001022567 43
D.melanogaster Rph 32002   NP_572651 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)