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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ccdc80, coiled-coil domain containing 80
Sequence ID:NM_026439
Entrez Gene ID:67896
Ensembl ID:ENSMUSG00000022665

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16|16 B5

Chromosomal Position (from UCSC)

Chromosomal Position:16: 45094163 - 45127664

NM_026439 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13734509416545094537
37422594509498445096869
226024164510449245104648
241725534511635845116494
255427024511821345118361
270328064512295945123062
280728874512623445126314
288836484512727645128036

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068102Full LengthBC167202coiled-coil domain containing 80
4483585IncompleteBC022704coiled-coil domain containing 80
5351536IncompleteBC096487coiled-coil domain containing 80
6485781IncompleteBC058751coiled-coil domain containing 80

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026439 NP_080715 Q8R2G6  

Related Sequences

 
mRNAGenPeptSwissProt
BC022704 AAH22704 Q8R2G6
BC058751 AAH58751 Q8R2G6
BC096487 AAH96487 Q8R2G6
BC167202 AAI67202 Q8R2G6
AK009795 BAB26508 Q8R2G6
AK011256 BAB27498 Q8R2G6
AK020169 BAB32018 Q8R2G6
AB075019 BAB85613 Q8R2G6
AK032359 BAC27834 Q8R2G6
AK132178 BAE21015 Q8R2G6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ccdc80 NP_080715 R.norvegicus Ccdc80 64387   NP_071988 94
H.sapiens CCDC80 151887 Gene Info NP_955806 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)