Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Col4a2, collagen, type IV, alpha 2
Sequence ID:NM_009932
Entrez Gene ID:12827
Ensembl ID:ENSMUSG00000031503

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 A1.1|8 5.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 11312828 - 11423584

 Exon Info From UCSC:
NM_009932

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861059Full LengthBC138040collagen, type IV, alpha 2
3487528IncompleteBC013560collagen, type IV, alpha 2
4035888IncompleteBC080789collagen, type IV, alpha 2
5151387IncompleteBC107685collagen, type IV, alpha 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034062  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009932 NP_034062 P08122 Collagen
C4

Related Sequences

 
mRNAGenPeptSwissProt
M15833 AAA37341 P08122
J04695 AAA50293 P08122
M23334 AAA51626 P08122
BC013560 AAH13560 P08122
BC080789 AAH80789 P08122
BC107685 AAI07686 P08122
BC138040 AAI38041 B2RQQ8
AY375463 AAQ83370 P08122
AY502946 AAR89901 P08122
AY502947 AAR89902 P08122
AK053858 BAC35559 P08122
AK075619 BAC35863 P08122
AK164096 BAE37626 P08122
X02896 CAA26655 P08122
X04410 CAA27998 P08122
X04647 CAA28308 P08122

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Col4a2 NP_034062 H.sapiens COL4A2 1284 Gene Info NP_001837 84
R.norvegicus Col4a2 306628   XP_225043 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta