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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sdhaf2, succinate dehydrogenase complex assembly factor 2
Sequence ID:NM_025333
Entrez Gene ID:66072
Ensembl ID:ENSMUSG00000024668

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 A|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 10502444 - 10525113

NM_025333 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2126371057500210577618
263827471059146910591578
274829651059165810591875
296631161059954810599698

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5698361Full LengthBC060090RIKEN cDNA 0610038F07 gene
30441476Full LengthBC085277RIKEN cDNA 0610038F07 gene
3500357IncompleteBC029630RIKEN cDNA 0610038F07 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079609  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025333 NP_079609 Q8C6I2 TPR_div1

Related Sequences

 
mRNAGenPeptSwissProt
BC029630 AAH29630 Q8C6I2
BC038924 AAH38924 Q8C6I2
BC048913 AAH48913 Q8C6I2
BC060090 AAH60090 Q8C6I2
BC085277 AAH85277 Q8C6I2
AK013454 BAB28863 Q8C6I2
AK075594 BAC35843 Q8C6I2
AK160175 BAE35674 Q8C6I2
AK160957 BAE36113 Q8C6I2
AK167228 BAE39352 Q8C6I2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sdhaf2 NP_079609 R.norvegicus Sdhaf2 361726   NP_001008372 98
H.sapiens SDHAF2 54949 Gene Info NP_060311 92
D.melanogaster CG14757 35797   NP_610363 56
D.melanogaster CG12895 36103   NP_610586 53
A.gambiae AgaP_AGAP012191 1280494   XP_320341 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)