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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Itga7, integrin alpha 7
Sequence ID:NM_008398
Entrez Gene ID:16404
Ensembl ID:ENSMUSG00000025348

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 D3|10 72.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 128933819 - 128958279

 Exon Info From UCSC:
NM_008398

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015988BC152747integrin alpha 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032424  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008398 NP_032424   Integrin_alpha
FG-GAP
Integrin_alpha2

Related Sequences

 
mRNAGenPeptSwissProt
L23421 AAA16598 Q61738
L23423 AAA16600 Q61738
BC152747 AAI52748  
AK010240 BAB26791 Q9CUZ5
AK157612 BAE34134 Q3TZS3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Itga7 NP_032424 R.norvegicus Itga7 81008   NP_110469 95
H.sapiens ITGA7 3679 Gene Info NP_001138468 87
A.gambiae AgaP_AGAP000307 1271955   XP_310816 36
D.melanogaster mew 32275   NP_511145 35
C.elegans ina-1 176296   NP_499032 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)