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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Becn1, beclin 1, autophagy related
Sequence ID:NM_019584
Entrez Gene ID:56208
Ensembl ID:ENSMUSG00000035086

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 D|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 101288812 - 101301854

 Exon Info From UCSC:
NM_019584

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2650059Full LengthBC005770beclin 1, autophagy related

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062530  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019584 NP_062530 O88597 APG6

Related Sequences

 
mRNAGenPeptSwissProt
AF077302 AAC68654 O88597
BC005770 AAH05770 O88597
AK032176 BAC27745 O88597
AK050329 BAC34192 O88597
AK083800 BAC39021 O88597

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Becn1 NP_062530 R.norvegicus Becn1 114558   NP_001029289 99
H.sapiens BECN1 8678 Gene Info NP_003757 98
A.gambiae AgaP_AGAP003858 1271595   XP_310418 55
D.melanogaster Atg6 42850   NP_651209 53
N.crassa NCU03122 3881139   XP_964981 36
S.cerevisiae VPS30 855983   NP_015205 35
A.thaliana ATG6 825344   NP_567116 34
S.pombe SPAC20G8.10c 3361548   NP_001018232 33
C.elegans bec-1 177345   NP_500844 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)