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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Aprt, adenine phosphoribosyl transferase
Sequence ID:NM_009698
Entrez Gene ID:11821
Ensembl ID:ENSMUSG00000006589

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, pancreas, pineal gland, pituitary gland, placenta, pooled tissue, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 E1|8 67.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 122574828 - 122576890

NM_009698 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1391125098536125098926
392470125099036125099114
471604125099301125099434
605711125100414125100520
712866125100652125100806

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3152733Full LengthBC005667adenine phosphoribosyl transferase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033828  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_009698 NP_033828 Q9DCY3   Pribosyltran

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M11310 AAA37255 P08030 EC 2.4.2.7
BC005667 AAH05667 Q6PK77  
AK002350 BAB22029 Q9DCY3  
AB033539 BAD95571 Q6PK77  
AB033540 BAD95572 Q564P4  
AK153201 BAE31801 Q6PK77  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Aprt NP_033828 R.norvegicus Aprt 292072   NP_001013079 93
H.sapiens APRT 353 Gene Info NP_000476 83
S.cerevisiae APT1 854986   NP_013690 50
N.crassa NCU02090 3879876   XP_963727 49
D.melanogaster Aprt 48224   NP_476637 48
S.pombe apt1 2542022   NP_594433 46
C.elegans T19B4.3 172232   NP_491663 46
A.gambiae AgaP_AGAP005723 1276396   XP_315739 44
A.thaliana APT1 839636   NP_564284 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)