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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Trim71, tripartite motif-containing 71
Sequence ID:NM_001042503
Entrez Gene ID:636931
Ensembl ID:ENSMUSG00000079259

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 F3|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 114511274 - 114512597

NM_001042503 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
82829114420392114423213
28302964114424850114424984
29653132114434071114434238
31335197114471422114473486

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9093220IncompleteBC169200tripartite motif-containing 71

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001042503 NP_001035968 Q1PSW8  

Related Sequences

 
mRNAGenPeptSwissProt
DQ005956 AAY55947 Q1PSW8
AK048065 BAC33232 Q8C888

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Trim71 NP_001035968 R.norvegicus Trim71 301042   XP_236676 98
H.sapiens TRIM71 131405 Gene Info NP_001034200 94
C.elegans lin-41 172760   NP_001020999 40
A.gambiae AgaP_AGAP005125 1274803   XP_314006 37
D.melanogaster wech 44653   NP_001137614 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)