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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Icosl, icos ligand
Sequence ID:NM_015790
Entrez Gene ID:50723
Ensembl ID:ENSMUSG00000000732

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 C1|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 78069458 - 78079525

NM_015790 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11687753211277532279
1692877753390577534023
2886417753448277534835
6429357753645177536744
93610857753794977538098
108611157753988877539917
111627487754063777542269

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4217333Full LengthBC029227icos ligand

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056605  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015790 NP_056605 Q9JHJ8
Q544C7
C2-set_2

Related Sequences

 
mRNAGenPeptSwissProt
AF199027 AAF34738 Q9JHJ8
Q544C7
AF216747 AAF45149 Q9JHJ8
Q544C7
BC029227 AAH29227 Q9JHJ8
Q544C7
AF394451 AAK77544 Q9JHJ8
AK041421 BAC30938 Q9JHJ8
Q544C7
AK220220 BAD90145 Q571G9
AK136074 BAE22807 Q3UWV7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Icosl NP_056605 R.norvegicus Icoslg 499415   XP_574731 71
H.sapiens ICOSLG 23308 Gene Info NP_056074 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)