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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Sh3gl1, SH3-domain GRB2-like 1
Sequence ID:NM_001252471
NM_013664
Entrez Gene ID:20405
Ensembl ID:ENSMUSG00000003200

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 D|17 35.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 56016752 - 56036635

Transcript StartTranscript EndChromosomal Start Chromosomal End
19875615617256157158
98810445615726656157322
104511695615740556157529
117012735615799756158100
127414325615822656158384
143315665615846256158595
156717105615873856158881
171117835615934856159420
178418525615954556159613
185320145617583756175998

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861622Full LengthBC138602SH3-domain GRB2-like 1
8861623Full LengthBC138603SH3-domain GRB2-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038692  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001252471 NP_001239400    
NM_013664 NP_038692 Q62419
Q3TRJ7
SH3_1
BAR

Related Sequences

 
mRNAGenPeptSwissProt
U58885 AAC71775 Q62419
Q3TRJ7
BC138602 AAI38603 Q3TRJ7
BC138603 AAI38604 Q3TRJ7
AK154836 BAE32864 Q3U3C4
AK162715 BAE37032 Q62419
Q3TRJ7
AK167505 BAE39581 Q3TJB4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sh3gl1 NP_038692 H.sapiens SH3GL1 6455 Gene Info NP_003016 94
C.elegans unc-57 172078   NP_001122513 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)