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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Foxn4, forkhead box N4
Sequence ID:NM_148935
Entrez Gene ID:116810
Ensembl ID:ENSMUSG00000042002

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 114254164 - 114263022

NM_148935 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11587114704172114705758
15881980114706567114706959
19812188114708516114708723
21892285114709758114709854
22862413114710358114710485
24142533114710874114710993
25342661114711083114711210
26622807114713017114713162
28082896114722981114723069
28972970114723696114723769

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30698162Full LengthBC092242forkhead box N4
40141600Full LengthBC130222forkhead box N4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_683737  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_148935 NP_683737 Q8K3Q3 Fork_head

Related Sequences

 
mRNAGenPeptSwissProt
BC092242 AAH92242 Q8K3Q3
BC130222 AAI30223 Q8K3Q3
AY039039 AAK72101 Q8K3Q3
AF323488 AAL06288 Q8K3Q3
AK081735 BAE43374 Q3V2Y1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Foxn4 NP_683737 R.norvegicus Foxn4 288736   NP_001099405 88
H.sapiens FOXN4 121643 Gene Info NP_998761 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)