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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Msx2, Homeobox, msh-like 2
Sequence ID:NM_013601
Entrez Gene ID:17702
Ensembl ID:ENSMUSG00000021469

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 B1|13 32.0

Chromosomal Position (from UCSC)

Chromosomal Position:13: 53471506 - 53472747

NM_013601 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
117135356224953563961
171421625356770053568148

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9055744Full LengthBC141132homeobox, msh-like 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038629  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013601 NP_038629 Q03358 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC141132 AAI41133 Q3UZH5
AK131974 BAE20914 Q3UZH5
Q03358
AK133846 BAE21882 Q3UZH5
Q03358
X59252 CAA41945 Q03358

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Msx2 NP_038629 R.norvegicus Msx2 25483   NP_037114 99
H.sapiens MSX2 4488 Gene Info NP_002440 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)