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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cxxc1, CXXC finger 1 (PHD domain)
Sequence ID:NM_028868
Entrez Gene ID:74322
Ensembl ID:ENSMUSG00000024560

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 E2|18

Chromosomal Position (from UCSC)

Chromosomal Position:18: 74216213 - 74221491

 Exon Info From UCSC:
NM_028868

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3980339Full LengthBC030938CXXC finger 1 (PHD domain)
3501507IncompleteBC012261CXXC finger 1 (PHD domain)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_083144  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_028868 NP_083144 Q9CWW7
Q541B1
PHD
zf-CXXC

Related Sequences

 
mRNAGenPeptSwissProt
BC030938 AAH30938 Q9CWW7
Q541B1
AY099096 AAM28246 Q9CWW7
Q541B1
AK010337 BAB26862 Q9CWW7
Q541B1
AK083655 BAC38986 Q9CWW7
Q541B1
AK146688 BAE27361 Q3UIZ4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cxxc1 NP_083144 R.norvegicus Cxxc1 291440   NP_001073166 99
H.sapiens CXXC1 30827 Gene Info NP_055408 97
A.gambiae AgaP_AGAP004704 1278526   XP_318129 57
D.melanogaster CG17446 31880   NP_572556 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)