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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tpr, translocated promoter region
Sequence ID:NM_133780
Entrez Gene ID:108989
Ensembl ID:ENSMUSG00000006005

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 G1|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 150423841 - 150449929

 Exon Info From UCSC:
NM_133780

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9056019Full LengthBC141406translocated promoter region
9056023Full LengthBC141410translocated promoter region
5010773IncompleteBC108349translocated promoter region
5035544IncompleteBC021320translocated promoter region
30277659IncompleteBC060955translocated promoter region

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598541  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001110146 NP_001103616    
NM_021400 NP_067375    
NM_133780 NP_598541 Q7M739 TPR_MLP1_2

Related Sequences

 
mRNAGenPeptSwissProt
BC021320 AAH21320 Q05CS8
BC029834 AAH29834 Q8K2T9
BC108349 AAI08350 Q32P08
BC130021 AAI30022 A1L3C5
BC141406 AAI41407 Q7M739
BC141410 AAI41411 Q7M739
AY046504 AAL02135 Q91ZA5
AF490392 AAM03151 Q8R4A0
AB034730 BAA92310 Q9JM99
AK076012 BAC36119 Q8BK71
AK077396 BAC36781 Q8BIX0
AK088078 BAC40132 Q8BU18
AK132381 BAE21135 Q3V1L5
AK132597 BAE21253 Q9JM99
AK137029 BAE23209 Q3UVR0
AK149469 BAE28900 Q9JM99
AK157716 BAE34164 Q8BU18
AK157974 BAE34294 Q3TZB5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tpr NP_598541 R.norvegicus Tpr 304862   NP_001100655 98
H.sapiens TPR 7175 Gene Info NP_003283 94
A.gambiae AgaP_AGAP001754 1281420   XP_321328 29
D.melanogaster Mtor 36264   NP_477067 26
A.thaliana NUA 844268   NP_001185436 25
N.crassa NCU04059 3873797   XP_957674 25
S.pombe nup211 2538843   NP_588236 24
S.cerevisiae MLP1 853970   NP_013021 24

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)