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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Smc6, structural maintenance of chromosomes 6
Sequence ID:NM_025695
Entrez Gene ID:67241
Ensembl ID:ENSMUSG00000020608

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 A2|12

Chromosomal Position (from UCSC)

Chromosomal Position:12: 11271733 - 11317892

 Exon Info From UCSC:
NM_025695

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30536320Full LengthBC090630structural maintenance of chromosomes 6
30052739IncompleteBC099955structural maintenance of chromosomes 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079971  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025695 NP_079971 Q924W5 SMC_N

Related Sequences

 
mRNAGenPeptSwissProt
BC026429 AAH26429 Q924W5
BC048790 AAH48790 Q924W5
BC090630 AAH90630 Q924W5
BC099955 AAH99955 Q924W5
AK003872 BAB23051 Q924W5
AK009009 BAB26022 Q924W5
AK011982 BAB27956 Q924W5
AK012626 BAB28365 Q924W5
AK014442 BAB29353 Q924W5
AK050341 BAC34200 Q924W5
AK088002 BAC40087 Q924W5
AK220488 BAD90287 Q924W5
AK135873 BAE22709 Q924W5
AK148478 BAE28576 Q924W5
AJ310552 CAC39250 Q924W5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Smc6 NP_079971 R.norvegicus Smc6 313961   NP_001101484 98
H.sapiens SMC6 79677 Gene Info NP_001135758 91
A.thaliana SMC6A 830659   NP_196383 31
N.crassa NCU02402 3875869   XP_959722 31
A.thaliana MIM 836267   NP_200954 30
C.elegans F54D5.14 174776   NP_496476 29
C.elegans C23H4.6 181384   NP_510041 29
S.pombe smc6 2539020   NP_587906 29
A.gambiae AgaP_AGAP002985 1272971   XP_311902 28
D.melanogaster CG5524 42876   NP_651228 28
S.cerevisiae SMC6 851099   NP_013487 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)