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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Lox, lysyl oxidase
Sequence ID:NM_010728
Entrez Gene ID:16948
Ensembl ID:ENSMUSG00000024529

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:18 D1|18 29.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:18: 52517447 - 52528954

NM_010728 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
119965267689152678886
199721125268044752680562
211322085268089652680991
220923655268473652684892
236625035268655452686691
250426125268793252688040
261336045268837052689361

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2655752Full LengthBC018439lysyl oxidase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034858  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_010728 NP_034858 P28301 EC 1.4.3.13 Lysyl_oxidase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M65142 AAA19032 P28301
Q3TXH3
EC 1.4.3.13
M65143 AAA20185 P28301 EC 1.4.3.13
BC018439 AAH18439 P28301
Q3TXH3
EC 1.4.3.13
AK135213 BAE22461 Q3UXV2  
AK141995 BAE24907 P28301
Q3TXH3
EC 1.4.3.13
AK159241 BAE34923 Q3TX90  
AK159263 BAE34943 P28301
Q3TXH3
EC 1.4.3.13
AK159368 BAE35026 Q3TX90  
AK159682 BAE35285 Q3TWI1  
AK159796 BAE35377 P28301
Q3TXH3
EC 1.4.3.13
AK160096 BAE35626 P28301
Q3TXH3
EC 1.4.3.13
AK164634 BAE37854 Q3TP83  
AK166279 BAE38676 Q3TLP7  
AK166386 BAE38745 Q3TLP7  
AK166442 BAE38779 Q3TLP7  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lox NP_034858 R.norvegicus Lox 24914   NP_058757 95
H.sapiens LOX 4015 Gene Info NP_002308 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)