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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Arid2, AT rich interactive domain 2 (ARID, RFX-like)
Sequence ID:NM_175251
Entrez Gene ID:77044
Ensembl ID:ENSMUSG00000033237

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15 F1|15

Chromosomal Position (from UCSC)

Chromosomal Position:15: 96287520 - 96352033

 Exon Info From UCSC:
NM_175251

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4021271Full LengthBC027180AT rich interactive domain 2 (ARID, RFX-like)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_175251 NP_780460 Q8CET8  

Related Sequences

 
mRNAGenPeptSwissProt
BC027180 AAH27180 Q8R2U9
AK007269 BAB24929 Q9D982
AK014481 BAC25438 Q8CET8
AK034964 BAC28898 Q8BS84
AK173201 BAD32479 Q69ZG5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Arid2 NP_780460 R.norvegicus Arid2 366980   XP_345868 95
H.sapiens ARID2 196528 Gene Info NP_689854 92
A.gambiae AgaP_AGAP006990 1270109   XP_001688081 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)