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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Clint1, clathrin interactor 1
Sequence ID:NM_001045520
Entrez Gene ID:216705
Ensembl ID:ENSMUSG00000006169

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B1.1|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 45882396 - 45910623

 Exon Info From UCSC:
NM_001045520

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068127Full LengthBC167227clathrin interactor 1
3592699IncompleteBC004080clathrin interactor 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001045520 NP_001038985    

Related Sequences

 
mRNAGenPeptSwissProt
BC004080 AAH04080 Q99KN9
BC167227 AAI67227  
AB093212 BAC41396 Q99KN9
AK143544 BAE25429 Q3UPG6
AK147875 BAE28195 Q3UGL3
AK167454 BAE39540 Q3TJF5
AK168991 BAE40791 Q5SUH7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Clint1 NP_001038985 R.norvegicus Clint1 360515   NP_001002022 98
H.sapiens CLINT1 9685 Gene Info NP_055481 95
A.gambiae AgaP_AGAP004504 1274651   XP_313803 65
D.melanogaster lqfR 42632   NP_732734 48
C.elegans rsd-3 181358   NP_509973 37
A.thaliana AT5G11710 831043   NP_196732 36
S.cerevisiae ENT3 853589   NP_012659 34
S.pombe SPCC794.11c 2539421   NP_587759 34
N.crassa NCU00725 3880528   XP_964378 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)