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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nr5a2, nuclear receptor subfamily 5, group A, member 2
Sequence ID:NM_001159769
NM_030676
Entrez Gene ID:26424
Ensembl ID:ENSMUSG00000026398

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 E4|1 78.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 136845464 - 136960290

 Exon Info From UCSC:
NM_001159769
NM_030676

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860864Full LengthBC137845nuclear receptor subfamily 5, group A, member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_109601  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001159769 NP_001153241    
NM_030676 NP_109601 P45448 Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
M81385 AAA39446 Q61807
M81385 AAA39447 P45448
BC137845 AAI37846 P45448
DQ133942 AAZ99450 Q1WLP7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nr5a2 NP_109601 R.norvegicus Nr5a2 60349   NP_068510 97
H.sapiens NR5A2 2494 Gene Info NP_995582 90
A.gambiae AgaP_AGAP005661 1276344   XP_556310 56
D.melanogaster ftz-f1 40045   NP_524143 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)