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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tom1l1, target of myb1-like 1 (chicken)
Sequence ID:NM_028011
Entrez Gene ID:71943
Ensembl ID:ENSMUSG00000020541

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 D|11 53.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 90645692 - 90687582

 Exon Info From UCSC:
NM_028011

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3499918Full LengthBC004710target of myb1-like 1 (chicken)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_028011 NP_082287    

Related Sequences

 
mRNAGenPeptSwissProt
BC004710 AAH04710 Q923U0
AF395837 AAK83377 Q923U0
AK009826 BAB26526 Q923U0
AK033712 BAC28440 Q8BZR6
AK083630 BAC38972 Q923U0
AJ505007 CAD43734 Q7TNI6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tom1l1 NP_082287 R.norvegicus RGD1562626 287622   XP_002727836 90
H.sapiens TOM1L1 10040 Gene Info NP_005477 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)