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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Trat1, T cell receptor associated transmembrane adaptor 1
Sequence ID:NM_198297
Entrez Gene ID:77647
Ensembl ID:ENSMUSG00000030775

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 B5|16

Chromosomal Position (from UCSC)

Chromosomal Position:16: 48734327 - 48771974

NM_198297 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13424873480248735143
3434314874028948740377
4324934874231148742372
4945304875436148754397
5316414876147748761587
6426844877202648772068

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40049557Full LengthBC104350T cell receptor associated transmembrane adaptor 1
40049558Full LengthBC104351T cell receptor associated transmembrane adaptor 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_198297 NP_938039    

Related Sequences

 
mRNAGenPeptSwissProt
BC104350 AAI04351 Q3UU67
BC104351 AAI04352 Q3UU67
AK138735 BAE23761 Q3UU67
AJ297969 CAC41082 Q3UU67

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Trat1 NP_938039 R.norvegicus Trat1 498075   NP_001033070 90
H.sapiens TRAT1 50852 Gene Info NP_057472 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)