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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Atp2b1, ATPase, Ca++ transporting, plasma membrane 1
Sequence ID:NM_026482
Entrez Gene ID:67972
Ensembl ID:ENSMUSG00000019943

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10|10 C3

Chromosomal Position (from UCSC)

Chromosomal Position:10: 99018777 - 99024343

 Exon Info From UCSC:
NM_026482

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4503278IncompleteBC030901ATPase, Ca++ transporting, plasma membrane 1
4951438IncompleteBC029045ATPase, Ca++ transporting, plasma membrane 1
5037925IncompleteBC057180ATPase, Ca++ transporting, plasma membrane 1
5357422IncompleteBC024831ATPase, Ca++ transporting, plasma membrane 1
5365647IncompleteBC049262ATPase, Ca++ transporting, plasma membrane 1
9093394IncompleteBC169244ATPase, Ca++ transporting, plasma membrane 1
9093395IncompleteBC169245ATPase, Ca++ transporting, plasma membrane 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080758  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026482 NP_080758   E1-E2_ATPase
Cation_ATPase_C
Cation_ATPase_N
Hydrolase

Related Sequences

 
mRNAGenPeptSwissProt
BC024831 AAH24831 Q05CJ5
BC029045 AAH29045 Q8K314
BC049262 AAH49262 Q8K314
BC057180 AAH57180 Q6PG79
AK161995 BAE36672 Q3TSK3
AK170163 BAE41609 Q3TDJ2
AK170926 BAE42119 Q3TC38

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atp2b1 NP_080758 H.sapiens ATP2B1 490 Gene Info NP_001673 100
R.norvegicus Atp2b1 29598   NP_445763 98
A.thaliana ACA8 835815   NP_851200 45
A.thaliana ACA10 829112   NP_194719 45
A.thaliana ACA9 821671   NP_188755 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)