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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Abtb1, ankyrin repeat and BTB (POZ) domain containing 1
Sequence ID:NM_030251
Entrez Gene ID:80283
Ensembl ID:ENSMUSG00000030083

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 D1|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 88835915 - 88841866

 Exon Info From UCSC:
NM_030251

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3483893Full LengthBC003234ankyrin repeat and BTB (POZ) domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_084527  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_030251 NP_084527 Q99LJ2 Ank
BTB

Related Sequences

 
mRNAGenPeptSwissProt
BC003234 AAH03234 Q99LJ2
AB053477 BAB55652 Q99LJ2
AK088437 BAC40352 Q99LJ2
AK220208 BAD90133 Q571I1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Abtb1 NP_084527 R.norvegicus Abtb1 297432   NP_001005902 98
H.sapiens ABTB1 80325 Gene Info NP_742024 94
S.pombe btb3 2542872   NP_593682 35
A.thaliana AT2G04740 815017   NP_178551 33
N.crassa NCU03186 3881435   XP_965286 33
S.cerevisiae YIL001W 854816   NP_012265 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)