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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ldhc, lactate dehydrogenase C
Sequence ID:NM_013580
Entrez Gene ID:16833
Ensembl ID:ENSMUSG00000030851

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 B4|7 23.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 46861262 - 46878142

NM_013580 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1395411663254116670
401725411713254117264
1732905412177854121895
2914645412496854125141
4656385412828154128454
6397565413104554131162
7578805413184354131966
88113105413308254133511

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6774010Full LengthBC049602lactate dehydrogenase C

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038608  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_013580 NP_038608 Q548Z6
P00342
EC 1.1.1.27 Ldh_1_N
Ldh_1_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M17587 AAA39425 Q548Z6
P00342
EC 1.1.1.27
L10389 AAA72343 Q64483  
M12781 AAA88313 Q61797  
M12781 AAA88314 Q61796  
BC049602 AAH49602 Q548Z6
P00342
EC 1.1.1.27
AK007058 BAB24844 Q548Z6
P00342
EC 1.1.1.27
AK161399 BAE36375 Q548Z6
P00342
EC 1.1.1.27
X04752 CAA28449 Q548Z6
P00342
EC 1.1.1.27

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ldhc NP_038608 R.norvegicus Ldhc 29634   NP_058962 89
H.sapiens LDHC 3948 Gene Info NP_002292 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)