Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tcf21, transcription factor 21
Sequence ID:NM_011545
Entrez Gene ID:21412
Ensembl ID:ENSMUSG00000045680

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 A3|10 16.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 22817278 - 22820125

NM_011545 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
125652253707822537631
56612402253925922539933

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6529241Full LengthBC053525transcription factor 21

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035675  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011545 NP_035675 O35437 HLH

Related Sequences

 
mRNAGenPeptSwissProt
AF029753 AAB84256 O35437
AF036945 AAC23537 O35437
AF035717 AAC62513 O35437
AF047418 AAC62531 O35437
BC053525 AAH53525 O35437
AB009453 BAA23883 O35437
AK011575 BAB27709 O35437
AK135423 BAE22527 O35437
AK157289 BAE34032 O35437

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tcf21 NP_035675 R.norvegicus Tcf21 252856   NP_001027569 99
H.sapiens TCF21 6943 Gene Info NP_938206 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)