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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mcl1, myeloid cell leukemia sequence 1
Sequence ID:NM_008562
Entrez Gene ID:17210
Ensembl ID:ENSMUSG00000038612

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F2.1|3 43.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 95659818 - 95661936

NM_008562 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12719546264295462912
2727679546291495463409
76810159546368395463930
101634879546462995467100

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3491015Full LengthBC003839myeloid cell leukemia sequence 1
3493739Full LengthBC005427myeloid cell leukemia sequence 1
4190996Full LengthBC021638myeloid cell leukemia sequence 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032588  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008562 NP_032588 P97287 Bcl-2

Related Sequences

 
mRNAGenPeptSwissProt
U35623 AAC31790 P97287
BC003839 AAH03839 P97287
BC005427 AAH05427 P97287
BC021638 AAH21638 P97287
GU182318 ACZ54910 D2K6L9
AK010424 BAB26927 P97287
AK159504 BAE35137 P97287
AK160594 BAE35901 P97287

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mcl1 NP_032588 R.norvegicus Mcl1 60430   NP_068618 95
H.sapiens MCL1 4170 Gene Info NP_068779 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)