Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. H2-DMa, histocompatibility 2, class II, locus DMa
Sequence ID:NM_010386
Entrez Gene ID:14998
Ensembl ID:ENSMUSG00000037649

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 B1|17 18.56 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 34122831 - 34139080

NM_010386 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1883427261534272702
893733427405834274342
3746523427484734275125
6537813427535134275479

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3591389Full LengthBC001996histocompatibility 2, class II, locus DMa
6394795Full LengthBC049992histocompatibility 2, class II, locus DMa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034516  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010386 NP_034516 Q9BCZ3 MHC_II_alpha
C1-set

Related Sequences

 
mRNAGenPeptSwissProt
U20305 AAA86483 Q31607
U20307 AAA86484 Q31607
U20311 AAA86487 Q31096
U35324 AAA91134 Q31621
U35325 AAA91135 Q31106
U35326 AAA91136 Q31107
U35327 AAA91137 Q31621
U35328 AAA91138 Q31108
U20308 AAB60514 Q31607
BC001996 AAH01996 Q9BCZ3
BC049992 AAH49992 Q31621
AK146950 BAE27559 Q31621
AK160460 BAE35801 Q31621
AK169900 BAE41446 Q31106
X62742 CAA44604 P28078
X90783 CAA62302 Q95605
X90784 CAA62303 Q95606
X90785 CAA62304 Q31621
X90786 CAA62305 Q31621
X90787 CAA62306 Q61832
X90788 CAA62307 Q95606
X90789 CAA62308 Q31106
X90790 CAA62309 Q31621
X90791 CAA62310 Q95605
X90792 CAA62311 Q95606
X90793 CAA62312 Q31621
X90794 CAA62313 Q31621
X90795 CAA62314 Q31621
X90963 CAA62451 Q31621

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus H2-DMa NP_034516 R.norvegicus RT1-DMa 294274   NP_942036 89
H.sapiens HLA-DMA 3108 Gene Info NP_006111 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)