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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. B2m, beta-2 microglobulin
Sequence ID:NM_009735
Entrez Gene ID:12010
Ensembl ID:ENSMUSG00000060802

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 F1-F3|2 69.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 122147686 - 122153082

NM_009735 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1118121973422121973539
119397121976608121976886
398426121977382121977410
427858121978386121978817

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6846389Full LengthBC085164beta-2 microglobulin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033865  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009735 NP_033865 P01887 C1-set

Related Sequences

 
mRNAGenPeptSwissProt
M10389 AAA39536 P01887
M10416 AAA39537 P01887
BC085164 AAH85164 P01887
AK019389 BAB31695 P01887
AK020632 BAB32158 Q9D239
AK028378 BAC25917 P01887
AK153255 BAE31846 Q3U679
AK166067 BAE38551 P01887
X01838 CAA25970 P01887

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus B2m NP_033865 R.norvegicus B2m 24223   NP_036644 83
H.sapiens B2M 567 Gene Info NP_004039 68

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta