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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rab8a, RAB8A, member RAS oncogene family
Sequence ID:NM_023126
Entrez Gene ID:17274
Ensembl ID:ENSMUSG00000003037

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, nervous, ovary, pancreas, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 B3.3|8 33.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 72161358 - 72180137

NM_023126 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12837468509874685380
2843447469232574692385
3454057469513874695198
4064837469842474698501
4845737469973874699827
5746397470022174700286
6406907470151874701568
69120127470394374705264

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4161110Full LengthBC019990RAB8A, member RAS oncogene family

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_075615  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_023126 NP_075615 P55258 Ras

Related Sequences

 
mRNAGenPeptSwissProt
S53270 AAB19682 P55258
BC019990 AAH19990 P55258
AK076048 BAC36146 P55258
AK079306 BAC37603 P55258
AK080740 BAC38003 P55258
AK147178 BAE27741 Q3UHW5
AB232600 BAF02862 Q0PD50

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rab8a NP_075615 R.norvegicus Rab8a 117103   NP_446450 100
H.sapiens RAB8A 4218 Gene Info NP_005361 97
D.melanogaster Rab8 40168   NP_524172 80
C.elegans rab-8 171935   NP_491199 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta