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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Itga5, integrin alpha 5 (fibronectin receptor alpha)
Sequence ID:NM_010577
Entrez Gene ID:16402
Ensembl ID:ENSMUSG00000000555

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 F3|15 57.4 cM

Chromosomal Position (from UCSC)

Chromosomal Position:15: 103344295 - 103366591

 Exon Info From UCSC:
NM_010577

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6821577Full LengthBC050943integrin alpha 5 (fibronectin receptor alpha)
6821577Full LengthBC059829integrin alpha 5 (fibronectin receptor alpha)
6504815IncompleteBC053431integrin alpha 5 (fibronectin receptor alpha)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034707  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010577 NP_034707 P11688
Q80YP5
FG-GAP
Integrin_alpha2

Related Sequences

 
mRNAGenPeptSwissProt
BC050943 AAH50943 Q80YP5
BC059829 AAH59829 Q80YP5
AK152594 BAE31343 Q3U7M6
X15203 CAA33273 P11688
X79003 CAA55638 P11688

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Itga5 NP_034707 R.norvegicus Itga5 315346   NP_001101588 98
H.sapiens ITGA5 3678 Gene Info NP_002196 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)