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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Muc1, mucin 1, transmembrane
Sequence ID:NM_013605
Entrez Gene ID:17829
Ensembl ID:ENSMUSG00000042784

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F1|3 44.8 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 89229084 - 89233377

NM_013605 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11268903297389033098
12714308903383289035135
143114838903523489035286
148416178903542289035555
161817398903568489035805
174018898903588789036036
189022358903694589037290

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3601782Full LengthBC005441mucin 1, transmembrane

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038633  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013605 NP_038633   SEA

Related Sequences

 
mRNAGenPeptSwissProt
M84683 AAA39756 Q02496
BC005441 AAH05441 Q99K60

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Muc1 NP_038633 R.norvegicus Muc1 24571   NP_036734 74
H.sapiens MUC1 4582 Gene Info NP_001191215 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)