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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Itgal, integrin alpha L
Sequence ID:NM_001253872
NM_001253873
NM_001253874
NM_008400
Entrez Gene ID:16408
Ensembl ID:ENSMUSG00000030830

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 F3|7 60.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 127296457 - 127333687


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9053642Full LengthBC145094integrin alpha L
9053643Full LengthBC145095integrin alpha L
9053644Full LengthBC145096integrin alpha L
40131105Full LengthBC145802integrin alpha L

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032426  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001253872 NP_001240801    
NM_001253873 NP_001240802    
NM_001253874 NP_001240803    
NM_008400 NP_032426 P24063 VWA
Integrin_alpha
FG-GAP
Integrin_alpha2

Related Sequences

 
mRNAGenPeptSwissProt
M60778 AAA39426 P24063
AF065901 AAD25884 Q9R200
AF065902 AAD25885 Q9WTV4
BC145094 AAI45095 B7ZN90
BC145095 AAI45096 B7ZN91
BC145096 AAI45097 B7ZN92
BC145802 AAI45803 Q3U159
JN986841 AEX14533 H2ELL3
AK141575 BAE24744 Q3URE4
AK155566 BAE33326 Q3TB85
AK156251 BAE33641 Q3U159
AK171389 BAE42429 Q3TB85
AK172394 BAE42982 Q3T9N8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Itgal NP_032426 R.norvegicus Itgal 308995   NP_001029170 88
H.sapiens ITGAL 3683 Gene Info NP_002200 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta