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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pdcd4, programmed cell death 4
Sequence ID:NM_001168491
NM_001168492
NM_011050
Entrez Gene ID:18569
Ensembl ID:ENSMUSG00000024975

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 D2|19 20.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:19: 53929313 - 53929850

 Exon Info From UCSC:
NM_001168491
NM_001168492
NM_011050

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6414089Full LengthBC055739programmed cell death 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035180  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001168491 NP_001161963    
NM_001168492 NP_001161964    
NM_011050 NP_035180 Q61823 MA3

Related Sequences

 
mRNAGenPeptSwissProt
BC055739 AAH55739 Q61823
D50465 BAA09056 Q61823
D86344 BAA13072 Q61823
AK134366 BAE22118 Q61823
AK172654 BAE43115 Q61823
CT010188 CAJ18396 Q61823

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pdcd4 NP_001161963 R.norvegicus Pdcd4 64031   NP_071601 99
H.sapiens PDCD4 27250 Gene Info NP_055271 97
A.gambiae AgaP_AGAP000378 1271876   XP_310731 50
D.melanogaster CG10990 32337   NP_001096977 42
A.thaliana AT4G24800 828582   NP_001031708 33
A.thaliana AT5G63190 836440   NP_568968 33
P.falciparum PF14_0546 812128   XP_001348720 24

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)