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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. 8030411F24Rik, RIKEN cDNA 8030411F24 gene
Sequence ID:NM_030135
Entrez Gene ID:78609
Ensembl ID:ENSMUSG00000027444

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 G3|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 148782008 - 148785936

NM_030135 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1300148607744148608043
301411148609084148609194
412601148611482148611671

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40130495Full LengthBC132218RIKEN cDNA 8030411F24 gene
40130499Full LengthBC132222RIKEN cDNA 8030411F24 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_084411  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_030135 NP_084411 Q8VII3 Cystatin

Related Sequences

 
mRNAGenPeptSwissProt
BC132218 AAI32219 Q8VII3
BC132222 AAI32223 Q8VII3
AF440735 AAL30841 Q8VII3
AK020193 BAB32024 Q8VII3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus 8030411F24Rik NP_084411 R.norvegicus LOC257643 257643   NP_671478 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)