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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hoxa3, homeobox A3
Sequence ID:NM_010452
Entrez Gene ID:15400
Ensembl ID:ENSMUSG00000079560

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 B3|6 26.3 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 52169094 - 52170744

NM_010452 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
216815211906152120740
168223305212211952122767
233124135213370652133788
241425155215083552150936
251625435216303852163065

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6476230Full LengthBC096612homeo box A3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034582  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010452 NP_034582 P02831 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
U56399 AAC52778 P02831
BC096612 AAH96612 P02831
AK051552 BAC34672 Q8BQ49
Y11717 CAA72404 P02831

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hoxa3 NP_034582 R.norvegicus RGD1561431 500125   XP_002729357 98
H.sapiens HOXA3 3200 Gene Info NP_109377 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)