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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cacna2d1, calcium channel, voltage-dependent, alpha2/delta subunit 1
Sequence ID:NM_001110843
NM_001110844
NM_001110845
NM_001110846
NM_009784
Entrez Gene ID:12293
Ensembl ID:ENSMUSG00000040118

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 A2|5 4.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 16371080 - 16374504

 Exon Info From UCSC:
NM_001110843
NM_001110844
NM_001110845
NM_001110846
NM_009784

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40061614Full LengthBC115871calcium channel, voltage-dependent, alpha2/delta subunit 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033914  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001110843 NP_001104313 O08532  
NM_001110844 NP_001104314    
NM_001110845 NP_001104315    
NM_001110846 NP_001104316    
NM_009784 NP_033914   VWA
Cache_1
VWA_N
VGCC_alpha2

Related Sequences

 
mRNAGenPeptSwissProt
U73483 AAB50138 O08532
U73484 AAB50139 O08532
U73485 AAB50140 O08532
U73486 AAB50141 O08532
U73487 AAB50142 O08532
BC115871 AAI15872 Q14BH8
AK052898 BAC35195 Q8C6Y3
AK163677 BAE37454 Q3TQD0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cacna2d1 NP_001104314 R.norvegicus Cacna2d1 25399   NP_037051 100
H.sapiens CACNA2D1 781 Gene Info NP_000713 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)