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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Chmp7, charged multivesicular body protein 7
Sequence ID:NM_134078
Entrez Gene ID:105513
Ensembl ID:ENSMUSG00000034190

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14 D2|14

Chromosomal Position (from UCSC)

Chromosomal Position:14: 69717002 - 69718065

NM_134078 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
113227011678570118106
132315057011832170118503
150615667011893570118995
156716657011920570119303
166617857011955470119673
178618347011991870119966
183519687012073470120867
196921547012101370121198
215523267012992970130100
232727067013199770132376

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5100379Full LengthBC024115CHMP family, member 7
5367653Full LengthBC033365CHMP family, member 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598839  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_134078 NP_598839 Q8R1T1 ESCRT-III

Related Sequences

 
mRNAGenPeptSwissProt
BC024115 AAH24115 Q8R1T1
BC033365 AAH33365 Q8R1T1
AK011732 BAC25343 Q78V99
AK031882 BAC27592 Q78V99

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chmp7 NP_598839 R.norvegicus Chmp7 364419   NP_001102342 98
H.sapiens CHMP7 91782 Gene Info NP_689485 96
A.gambiae AgaP_AGAP012459 1278583   XP_318197 29
C.elegans T24B8.2 174442   NP_495933 28
D.melanogaster CG5498 40250   NP_730525 27
A.thaliana AT3G62080 825381   NP_567125 27

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)