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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Lcat, lecithin cholesterol acyltransferase
Sequence ID:NM_008490
Entrez Gene ID:16816
Ensembl ID:ENSMUSG00000035237

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 D3|8 53.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 105939558 - 105943376

NM_008490 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15598108463456108464039
599823108465538108465762
824919108465845108465940
9201035108466037108466152
10361192108466230108466386
11931370108467124108467301

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4212194Full LengthBC028861lecithin cholesterol acyltransferase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032516  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_008490 NP_032516 P16301
Q791M3
EC 2.3.1.43 LACT

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
J05154 AAA39419 P16301
Q791M3
EC 2.3.1.43
BC028861 AAH28861 P16301 EC 2.3.1.43
AK004914 BAB23665 Q9CW47  
AK149476 BAE28903 P16301 EC 2.3.1.43

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lcat NP_032516 R.norvegicus Lcat 24530   NP_058720 93
H.sapiens LCAT 3931 Gene Info NP_000220 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)