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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hlf, hepatic leukemia factor
Sequence ID:NM_172563
Entrez Gene ID:217082
Ensembl ID:ENSMUSG00000003949

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 C-D|11 52.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 90336537 - 90338283

NM_172563 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
144409019784890202287
444146619020707190207291
466249979024909990249434
499856659025156390252230

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4196259Full LengthBC057693hepatic leukemia factor
6839029Full LengthBC058705hepatic leukemia factor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766151  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_172563 NP_766151 Q8BW74 bZIP_2

Related Sequences

 
mRNAGenPeptSwissProt
BC057693 AAH57693 Q8BW74
BC058705 AAH58705 Q8BW74
AK054062 BAC35642 Q8BW74
AK079068 BAC37522 Q8BVB2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hlf NP_766151 H.sapiens HLF 3131 Gene Info NP_002117 98
D.melanogaster Pdp1 45588   NP_729302 56
A.gambiae AgaP_AGAP006376 1276989   XP_001237806 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)