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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Sdha, succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
Sequence ID:NM_023281
Entrez Gene ID:66945
Ensembl ID:ENSMUSG00000021577

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:13 C1|13

Chromosomal Position (from UCSC)

Chromosomal Position:13: 74323933 - 74343429

 Exon Info From UCSC:
NM_023281

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5067510Full LengthBC031849succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
3981915IncompleteBC011301succinate dehydrogenase complex, subunit A, flavoprotein (Fp)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_075770  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_023281 NP_075770 Q8K2B3 EC 1.3.5.1 FAD_binding_2
Succ_DH_flav_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF095938 AAC72373 Q8K2B3 EC 1.3.5.1
BC011301 AAH11301 Q8K2B3 EC 1.3.5.1
BC031849 AAH31849 Q8K2B3 EC 1.3.5.1
AY618570 AAT40731 Q6IWE1  
DQ402975 ABD77308 Q8K2B3 EC 1.3.5.1
AK029520 BAC26491 Q8K2B3 EC 1.3.5.1
AK034928 BAC28884 Q8K2B3 EC 1.3.5.1
AK049590 BAC33831 Q8K2B3 EC 1.3.5.1
AK050475 BAC34276 Q8K2B3 EC 1.3.5.1
AK075990 BAC36101 Q8K2B3 EC 1.3.5.1
AK145923 BAE26754 Q8K2B3 EC 1.3.5.1
AK147286 BAE27822 Q8K2B3 EC 1.3.5.1
AK147624 BAE28032 Q8K2B3 EC 1.3.5.1
AK153085 BAE31710 Q8K2B3 EC 1.3.5.1
AK162148 BAE36754 Q8K2B3 EC 1.3.5.1
AK169254 BAE41018 Q8K2B3 EC 1.3.5.1
AK004362 BAE43173 Q8K2B3 EC 1.3.5.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sdha NP_075770 R.norvegicus Sdha 157074   NP_569112 98
H.sapiens SDHA 6389 Gene Info NP_004159 95
A.gambiae AgaP_AGAP010429 1272618   XP_311518 80
D.melanogaster SdhA 37228   NP_725882 77
C.elegans sdha-1 181108   NP_509446 72
A.thaliana SDH1-1 836809   NP_201477 72
C.elegans sdha-2 172968   NP_492798 72
S.cerevisiae YJL045W 853405   NP_012490 69
P.falciparum PF10_0334 810491   XP_001347618 66

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)