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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cnn2, calponin 2
Sequence ID:NM_007725
Entrez Gene ID:12798
Ensembl ID:ENSMUSG00000004665

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, pancreas, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10 C1|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 79988599 - 79995324

NM_007725 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11417945134479451484
1422637945410479454225
2643307945501779455083
3314687945518779455324
4695857945595879456074
5867327945617279456318
73317827945709579458144

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3589158Full LengthBC018482calponin 2
3589470Full LengthBC008181calponin 2
3594856Full LengthBC009144calponin 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031751  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007725 NP_031751 Q543F3
Q08093
CH
Calponin

Related Sequences

 
mRNAGenPeptSwissProt
BC008181 AAH08181 Q922F8
BC009144 AAH09144 Q543F3
Q08093
BC018482 AAH18482 Q543F3
Q08093
AK051845 BAC34787 Q543F3
Q08093

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cnn2 NP_031751 H.sapiens CNN2 1265 Gene Info NP_004359 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)