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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Casp4, caspase 4, apoptosis-related cysteine peptidase
Sequence ID:NM_007609
Entrez Gene ID:12363
Ensembl ID:ENSMUSG00000033538

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 A1|9 1.1 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 5321256 - 5336094

NM_007609 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15553088595308913
5631053212575321511
31140853228195322916
40958253236245323797
58381753247235324957
81896153271755327318
962107153284325328541
1072117553359955336098
1176143253365345336790

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30251263Full LengthBC061255caspase 4, apoptosis-related cysteine peptidase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031635  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_007609 NP_031635 P70343 EC 3.4.22.64 CARD
Peptidase_C14

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U59463 AAB09469 P70343 EC 3.4.22.64
BC061255 AAH61255 Q6P8H1  
AK151547 BAE30493 P70343 EC 3.4.22.64
AK171877 BAE42715 P70343 EC 3.4.22.64
AB480706 BAH96541 C6L648  
Y13089 CAA73531 P70343 EC 3.4.22.64

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Casp4 NP_031635 R.norvegicus Casp4 114555   NP_446188 89
H.sapiens CASP4 837 Gene Info NP_001216 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta