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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Efna1, ephrin A1
Sequence ID:NM_001162425
NM_010107
Entrez Gene ID:13636
Ensembl ID:ENSMUSG00000027954

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F1|3 48.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 89271735 - 89279641

 Exon Info From UCSC:
NM_001162425
NM_010107

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3484518Full LengthBC002046ephrin A1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034237  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001162425 NP_001155897    
NM_010107 NP_034237 Q9D7K8
P52793
Ephrin

Related Sequences

 
mRNAGenPeptSwissProt
U26188 AAA67563 P52793
U90662 AAB50237 P52793
BC002046 AAH02046 P52793
D38146 BAA07344 P52793
AK009144 BAB26102 Q9D7K8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Efna1 NP_034237 R.norvegicus Efna1 94268   NP_446051 95
H.sapiens EFNA1 1942 Gene Info NP_004419 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)