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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Syt17, synaptotagmin XVII
Sequence ID:NM_138649
Entrez Gene ID:110058
Ensembl ID:ENSMUSG00000058420

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 F2|7 56.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 118381855 - 118443552

NM_138649 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
7203125525369125525565
204359125551538125551693
360480125553437125553557
4811100125577346125577965
11011249125580336125580484
12501398125585861125586009
13991416125586632125586649
14171623125586859125587065

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062552Full LengthBC156838synaptotagmin XVII

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_619590  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_138649 NP_619590 Q920M7 C2

Related Sequences

 
mRNAGenPeptSwissProt
BC156838 AAI56839 Q920M7
AB069667 BAB69676 Q920M7
AK135098 BAE22421 Q920M7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Syt17 NP_619590 R.norvegicus Syt17 192189   NP_620204 99
H.sapiens SYT17 51760 Gene Info NP_057608 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)