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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Gapvd1, GTPase activating protein and VPS9 domains 1
Sequence ID:NM_025709
Entrez Gene ID:66691
Ensembl ID:ENSMUSG00000026867

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 B|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 34677483 - 34681657

 Exon Info From UCSC:
NM_025709

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6408778Full LengthBC060123GTPase activating protein and VPS9 domains 1
3158237IncompleteBC031478GTPase activating protein and VPS9 domains 1
5044865IncompleteBC048847GTPase activating protein and VPS9 domains 1
5374145IncompleteBC043715GTPase activating protein and VPS9 domains 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079985  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025709 NP_079985 Q6PAR5 VPS9

Related Sequences

 
mRNAGenPeptSwissProt
BC031478 AAH31478 Q6PAR5
BC043715 AAH43715 Q6PAR5
BC048847 AAH48847 Q6PAR5
BC057164 AAH57164 Q6PAR5
BC060123 AAH60123 Q6PAR5
EF155419 ABM68541 Q6PAR5
AK003521 BAB22834 Q6PAR5
AK014474 BAB29377 Q6PAR5
AK088851 BAC40613 Q6PAR5
AK129381 BAC98191 Q6PAR5
AK134776 BAE22277 Q6PAR5
AK150026 BAE29251 Q6PAR5
AK165047 BAE38017 Q6PAR5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gapvd1 NP_079985 R.norvegicus Gapvd1 311880   XP_231161 99
H.sapiens GAPVD1 26130 Gene Info NP_056450 98
D.melanogaster CG1657 32070   NP_572704 32
C.elegans rme-6 180463   NP_508208 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)