Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ccdc55, coiled-coil domain containing 55
Sequence ID:NM_001012309
Entrez Gene ID:237859
Ensembl ID:ENSMUSG00000037958

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B5|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 77075577 - 77078437

NM_001012309 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
124637685779376860255
246425727686185476861962
257327807686277476862981
278129097686408576864213
291029667686844576868501
296730577689015576890245
305831147689188076891936

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30300075Full LengthBC089560coiled-coil domain containing 55
3257613IncompleteBC016601coiled-coil domain containing 55

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001012309 NP_001012309 Q5NCR9  

Related Sequences

 
mRNAGenPeptSwissProt
BC016601 AAH16601 A0PJ67
BC089560 AAH89560 Q5NCR9
AK046155 BAC32615 Q8BQY7
AK041865 BAE20609 Q3V3D1
AK162143 BAE36751 Q3TSC4
AK168573 BAE40443 Q5NCR9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ccdc55 NP_001012309 R.norvegicus Nsrp1 303346   NP_001032266 90
H.sapiens NSRP1 84081 Gene Info NP_115517 76
D.melanogaster CG15747 32288   NP_727694 42
A.thaliana AT2G27285 817271   NP_565644 37
N.crassa NCU06243 3879249   XP_963094 37
A.thaliana AT1G55928 3767464   NP_001031197 36
A.thaliana AT2G27280 817270   NP_565643 35
C.elegans ccdc-55 175533   NP_497831 31
S.pombe SPAC29A4.06c 2542169   NP_594876 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)